Super Enhancer Details

General details

Super-Enhancer ID:	SE_00146
Genomic locus:	chr11:114002065-114074418
Size/Length:	72353 bp
Genome:	Human - hg19
Cell/Tissue:	Adipose Nuclei
Factor(s) Used:	H3K27ac - (Used to define enhancers) H3K27ac - (Used to rank SEs)
Input/WCE:	GSM621401
Reference:	Hnisz D. et al., 2013 Cell - 24119843

Associated gene details

RefSeq ID:	NM_001018011
Gene Symbol:	ZBTB16
Chromosome:	chr11
TSS:	113930430 (Transcription start site)
TES:	114121397 (Transcription end site)
Strand:	+
Number of Exons:	7
External Links:

Software and parameters used

Stitching Distance:	12.5 kb
Read Mapping:	Bowtie (version 0.12.9) with parameters -k 2, -m 2, -n 2, -best.
Peak Calling:	MACS (version 1.4.1) with parameters -p 1e-9,-keep-dup = auto, -w -S -space = 50
TSS Exclusive Zone:	+/- 2 kb
Enhancer-gene Assignment:	Genes were assigned to SEs within a 50 kb window. In cases where experimentally verified enhancer-gene assignments were available, genes were assigned to enhancers based on those studies.

FASTA sequence

>chr11:114002065-114074418
Sequence preview unavailable; use Download FASTA.

Wiggle files

Download Wiggle (WIG) files, generated by original data source.

Constituents of Super-enhancer - SE_00146

Constituent ID	SE ID	Chrom	Start	End	Constituent Size	MACS score
C001469	SE_00146	chr11	114002065	114012044	9979	1406.74
C001470	SE_00146	chr11	114012338	114015996	3658	652.76
C001471	SE_00146	chr11	114016776	114019147	2371	489.88
C001472	SE_00146	chr11	114019210	114040215	21005	3100
C001473	SE_00146	chr11	114041039	114044671	3632	1015.75
C001474	SE_00146	chr11	114048829	114054998	6169	1589.26
C001475	SE_00146	chr11	114064181	114074418	10237	3100