Super Enhancer Details

General details

Super-Enhancer ID:	SE_00466
Genomic locus:	chr11:113929216-113983360
Size/Length:	54144 bp
Genome:	Human - hg19
Cell/Tissue:	Adipose Nuclei
Factor(s) Used:	H3K27ac - (Used to define enhancers) H3K27ac - (Used to rank SEs)
Input/WCE:	GSM621401
Reference:	Hnisz D. et al., 2013 Cell - 24119843

Associated gene details

RefSeq ID:	NM_001018011
Gene Symbol:	ZBTB16
Chromosome:	chr11
TSS:	113930430 (Transcription start site)
TES:	114121397 (Transcription end site)
Strand:	+
Number of Exons:	7
External Links:

Software and parameters used

Stitching Distance:	12.5 kb
Read Mapping:	Bowtie (version 0.12.9) with parameters -k 2, -m 2, -n 2, -best.
Peak Calling:	MACS (version 1.4.1) with parameters -p 1e-9,-keep-dup = auto, -w -S -space = 50
TSS Exclusive Zone:	+/- 2 kb
Enhancer-gene Assignment:	Genes were assigned to SEs within a 50 kb window. In cases where experimentally verified enhancer-gene assignments were available, genes were assigned to enhancers based on those studies.

FASTA sequence

>chr11:113929216-113983360
Sequence preview unavailable; use Download FASTA.

Wiggle files

Download Wiggle (WIG) files, generated by original data source.

Constituents of Super-enhancer - SE_00466

Constituent ID	SE ID	Chrom	Start	End	Constituent Size	MACS score
C001460	SE_00466	chr11	113929216	113934203	4987	2137.47
C001461	SE_00466	chr11	113936462	113937773	1311	116.69
C001462	SE_00466	chr11	113938097	113939411	1314	95.99
C001463	SE_00466	chr11	113941096	113958222	17126	3100
C001464	SE_00466	chr11	113962169	113964950	2781	574.43
C001465	SE_00466	chr11	113966192	113967333	1141	141.52
C001466	SE_00466	chr11	113967689	113969436	1747	171.17
C001467	SE_00466	chr11	113970023	113971707	1684	149.95
C001468	SE_00466	chr11	113979841	113983360	3519	1125.98