Super Enhancer Details

General details

Super-Enhancer ID:	SE_00731
Genomic locus:	chr7:6413963-6439665
Size/Length:	25702 bp
Genome:	Human - hg19
Cell/Tissue:	Adipose Nuclei
Factor(s) Used:	H3K27ac - (Used to define enhancers) H3K27ac - (Used to rank SEs)
Input/WCE:	GSM621401
Reference:	Hnisz D. et al., 2013 Cell - 24119843

Associated gene details

RefSeq ID:	NM_001142936
Gene Symbol:	DAGLB
Chromosome:	chr7
TSS:	6448746 (Transcription start site)
TES:	6487643 (Transcription end site)
Strand:	-
Number of Exons:	13
External Links:

Software and parameters used

Stitching Distance:	12.5 kb
Read Mapping:	Bowtie (version 0.12.9) with parameters -k 2, -m 2, -n 2, -best.
Peak Calling:	MACS (version 1.4.1) with parameters -p 1e-9,-keep-dup = auto, -w -S -space = 50
TSS Exclusive Zone:	+/- 2 kb
Enhancer-gene Assignment:	Genes were assigned to SEs within a 50 kb window. In cases where experimentally verified enhancer-gene assignments were available, genes were assigned to enhancers based on those studies.

FASTA sequence

>chr7:6413963-6439665
Sequence preview unavailable; use Download FASTA.

Wiggle files

Download Wiggle (WIG) files, generated by original data source.

Constituents of Super-enhancer - SE_00731

Constituent ID	SE ID	Chrom	Start	End	Constituent Size	MACS score
C005306	SE_00731	chr7	6413963	6418800	4837	1811.64
C005307	SE_00731	chr7	6419366	6420800	1434	195.68
C005308	SE_00731	chr7	6421302	6429001	7699	3100
C005309	SE_00731	chr7	6430438	6434593	4155	2980.53
C005310	SE_00731	chr7	6434691	6436598	1907	633.08
C005311	SE_00731	chr7	6437261	6439665	2404	191.88