Super Enhancer Details

General details

Super-Enhancer ID:	SE_00763
Genomic locus:	chr11:128414232-128457994
Size/Length:	43762 bp
Genome:	Human - hg19
Cell/Tissue:	Adipose Nuclei
Factor(s) Used:	H3K27ac - (Used to define enhancers) H3K27ac - (Used to rank SEs)
Input/WCE:	GSM621401
Reference:	Hnisz D. et al., 2013 Cell - 24119843

Associated gene details

RefSeq ID:	NM_001143820
Gene Symbol:	ETS1
Chromosome:	chr11
TSS:	128328655 (Transcription start site)
TES:	128392205 (Transcription end site)
Strand:	-
Number of Exons:	8
External Links:

Software and parameters used

Stitching Distance:	12.5 kb
Read Mapping:	Bowtie (version 0.12.9) with parameters -k 2, -m 2, -n 2, -best.
Peak Calling:	MACS (version 1.4.1) with parameters -p 1e-9,-keep-dup = auto, -w -S -space = 50
TSS Exclusive Zone:	+/- 2 kb
Enhancer-gene Assignment:	Genes were assigned to SEs within a 50 kb window. In cases where experimentally verified enhancer-gene assignments were available, genes were assigned to enhancers based on those studies.

FASTA sequence

>chr11:128414232-128457994
Sequence preview unavailable; use Download FASTA.

Wiggle files

Download Wiggle (WIG) files, generated by original data source.

Constituents of Super-enhancer - SE_00763

Constituent ID	SE ID	Chrom	Start	End	Constituent Size	MACS score
C001510	SE_00763	chr11	128414232	128416242	2010	125.3
C001511	SE_00763	chr11	128416597	128421911	5314	2365.55
C001512	SE_00763	chr11	128424252	128427259	3007	391.54
C001513	SE_00763	chr11	128434390	128436401	2011	110.01
C001514	SE_00763	chr11	128436607	128441510	4903	978.44
C001515	SE_00763	chr11	128442551	128457994	15443	1277.91